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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909875.1_cds_XP_016459978.1_53447
CDS Infomation

[gene=LOC107783516] [db_xref=GeneID:107783516] [protein=chitin elicitor receptor kinase 1-like] [protein_id=XP_016459978.1] [location=complement(join(38977..39141,39219..39317,39414..39552,40319..40410,40489..40640,40737..40830,42131..42220,42676..42875,43207..43365,43487..43494,43589..43622,46547..47180))] [gbkey=CDS]
Sequence

ATGAGCATTAGAGCTGTAAAAACCATAACACTTACTCTGCAGCTTAGTCTTGGTTTTTTT
CTCTTCATTTTTATTAATGGTGAAGCCAAGTGTGGAAATGGTTGTGACATGGCTTTGGCT
TCGTACCATACTTGGCCAGGAGCTAATTTGACTTACATTAGTCACATATTCAACCGAACA
ATCCCAGATATTCTAAAATACAATCCTGAAATTACAAGCCAAGATAGTATCACTAGTGAT
ACGAAGATTAATGTCCCATTTTCTTGTGATTGTTTAAATGGTGATTTTTTGGGACATACT
TTTGTTTATAAAACAGTGTTTGGTGATACGTACAAAAAAGTTGCCACTATGGTCTTTGCA
AATCTTACAACGGAGTATTGGCTCAAACGGGTCAACACGTATGACCCGATCAACATACCG
GATTATGCCATGATCAATGTGACAGTGAATTGCTCGTGTGGCGATAGAGACGTGTCCGAC
GATTATGGGTTGTTCGCCACGTACCCTCTTCGTCGGGGAGAGAACTTGTCAACGGCGGCC
ATGGCGTCGGGTGTGCCGGCTGAGTTGCTGGAGAAGTTCAATCCGGGTTTGGATTTTGGT
TCCGGGTCAGGAATAGTGTTTGTGCCGGCTAGAGATGCATATGGAAAATTTCCATCATTG
AAGACAAGTTCAAAAGGAATCTCACGTGGAGCCATTGCTGGTATAATAGTGGCAGCTATT
TTTGGGGCTACTTTCTTTGCAGTTTGCCTTTATTTTGTATTTTATAGGAGCAAGCAAATA
GAGGAGGAATCATTTCTCCAAGGATCATCTGATGAACACTTTAATGAGCACTTTCGTCCT
CCAAAATTGGAGAAAATTACAGAATCAGGTCCTTTATTTGGTGTTATTTCTCCAAGGCCA
ACAGGGATCACAGTGGATAAATCGGTGGAATTTTCATATGAGGAACTTGCTAAGGCTACA
AATAACTTCAGCATGGAAAATAAGATTGGTCAAGGCGGCTTTGGATTAGTCTTTTATGGA
ATGTTAAAAGGCGAGAGAGCAGCAATTAAGAAAATGGATATGCAAGCATCGAAAGAATTC
TTCGCCGAGTTGAAAGTCTTAACGCACGTTCATCACTTGAACTTGGTACGCTTAATTGGA
TATTGTGTTGAAGGGTCTTTATTCTTAGTTTACGAATACATTGAAAATGGAAACCTTGGC
GAACACTTGCGCGGATCGGGCCGGAATCCATTGTCGTGGTCTACCAGGGTACAAATTGCT
CTTGATGCAGCTAGAGGACTCGAATATATCCATGAGCATACTGTTCCTTTATATATCCAC
CGTGATATTAAATCTGCTAATATTCTGATTGACAAAGACTTCCGTGCAAAGGTAGCCGAC
TTTGGACTTACAAAGCTAACTGAATTTGGAAGCACCTCTTTGCATACTCGGCTTGTGGGT
ACTTTTGGTTACATGCCTCCAGAGTACGCTCAGTATGGTGACGTTTCCCCGAAAGTTGAT
GTCTATGCTTTTGGAGTAGTGCTTTATGAACTAATATCTGCTAAAGAAGCTATTGTCAAG
ACGAATGAAGTTATAACTGAATCAAAGGGGCTTGTTGCTTTGTTTGAGGATGTTCTTAAC
CAGAATGGTGCTAGAGAAGGGTTACGCAAAGTGGTTGATCCCAAACTAGGAGATGACTAT
CCGCTAGATTCAGTCTGCAAGGTTGCTCAGCTTGCCAAGGCTTGCACACATGAAAATCCT
CAGTTGAGACCTAGCATGAGGTCCATAGTTGTAGCTTTAATGACTCTATCATCCTCAACT
GAGGATTGGGATATTGGTTCCTTTTATGAAAACCAAGGGCTTGTCCATCTCATGACAGGA
AGGTAG

Peptide Sequence

PEP ID

XP_016459978.1
PEP Infomation

PREDICTED: chitin elicitor receptor kinase 1-like [Nicotiana tabacum]
Sequence

MSIRAVKTITLTLQLSLGFFLFIFINGEAKCGNGCDMALASYHTWPGANLTYISHIFNRT
IPDILKYNPEITSQDSITSDTKINVPFSCDCLNGDFLGHTFVYKTVFGDTYKKVATMVFA
NLTTEYWLKRVNTYDPINIPDYAMINVTVNCSCGDRDVSDDYGLFATYPLRRGENLSTAA
MASGVPAELLEKFNPGLDFGSGSGIVFVPARDAYGKFPSLKTSSKGISRGAIAGIIVAAI
FGATFFAVCLYFVFYRSKQIEEESFLQGSSDEHFNEHFRPPKLEKITESGPLFGVISPRP
TGITVDKSVEFSYEELAKATNNFSMENKIGQGGFGLVFYGMLKGERAAIKKMDMQASKEF
FAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLGEHLRGSGRNPLSWSTRVQIA
LDAARGLEYIHEHTVPLYIHRDIKSANILIDKDFRAKVADFGLTKLTEFGSTSLHTRLVG
TFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKTNEVITESKGLVALFEDVLN
QNGAREGLRKVVDPKLGDDYPLDSVCKVAQLAKACTHENPQLRPSMRSIVVALMTLSSST
EDWDIGSFYENQGLVHLMTGR

Transcript Sequence

Gene sequence data has not been registered.